ST 732 - Spring 2011 Course Information
ST 732 - 2011
Applied Longitudinal Data Analysis
Instructor
Dennis D. Boos
5222 SAS Hall
email: boos@stat.ncsu.edu
phone: 515-1918
Office Hours: Tuesday, 11:45- 1:00 pm
Meeting Times
Mondays and Wednesdays, 11:45 to 1:00 pm in SAS 1108.
Grader
Dehan Kong
email: dkong2@unity.ncsu.edu
Office Hours: Thursdays, 3-4 pm.
Required Text
Lecture notes prepared by Marie Davidian will be used. These may be purchased at the Sir Speedy
across the street from Patterson on Hillsborough. You should obtain a copy.
Prerequisite
ST 512, Experimental Statistics for Biological Sciences II, or equivalent. Thus, students should be
familiar with basic notions of probability, random variables, and statistical inference, analysis of
variance, and (multiple) linear regression. Familiarity with matrix algebra is also useful. We will
review matrix algebra at the beginning of the course and make considerable use of matrix notation
and operations throughout. ST 512 involves the use of the SAS (Statistical Analysis System)
software package; thus, students are expected to have had some exposure to the use of SAS. The
course is meant to be accessible both to non-majors and majors. The underlying mathematical
theory will not be stressed, and the main focus will be on concepts and applications. Please see
the instructor if you have questions about the suitability of your background.
Grading
Plus/minus grading will be used.
The course grade will be based on homework assignments, the midterm
and final exam, and class participation.
The relative weight given to each of these components is
| Homework | 10% | |
| Data Analysis Project | 20% | |
| Midterm Exam (covers 1st half) | 35% | Wednesday, March 2 |
| Final Exam (covers 2nd half) | 35% | Monday, May 9 (8-11 am) |
There are no quotas or curves for A's and B's. I would be happy to give all A's.
I value class participation: attendance and willingness to ask and answer
questions in class. It will be used in deciding borderline grades.
Miscellaneous
-
Homework will be assigned once every two weeks. It will be
due at the beginning of class. As a rule, I do not accept late
homework. I allow students to work in groups
on homework if they like, but no one should copy directly from someone
else's paper (either present or past students). I stongly urge everyone to
work on their own as much as possible.
As the focus of the class is on the practical application of methods
for longitudinal data analysis, many of the problems will involve using statistical software to
carry out analyses on real data sets. To implement the analyses, we will use SAS; examples
of the use of this software are included in the lecture notes. The principles underlying the methods we
will learn involve much philosophy
and subjectivity; thus, each homework will also include "essay"-type questions to help you to
clarify your thinking on these matters.
You should not obtain
copies of previous student hw's or use them for helping to complete assignments.
(Part of the reason for making the hw grade count only 10% is due to abuse of
these rules. In particular, it is counter-productive to get much help on the hw
because you will not learn the material using that approach.)
-
Data Analysis Project: Students will carry out an analysis of data collected in a study that will
be described in detail in the assignment using methods covered in the class (which methods
are relevant is to be determined by the student). Students will need to formalize the scientific
questions posed by the investigator, carry out the appropriate analyses, interpret the results,
and write a comprehensive report for the investigator reporting on all of these activities. The
assignment will be handed out in late march and will be due on the last day of class.
- The midterm and final exams will be in-class, closed book exams (a legal handwritten note
sheet is allowed). The final will not be comprehensive except in the sense that the course builds
on previous knowledge. It will cover the second half of the course.
No cell phones or other electronic
devices should be in sight or used in any way.
- If you would like to audit the course, I require at least a 50%
grade on homework to get an official audit. (After many years of teaching and sitting in on
courses myself, I believe it is usually a waste of time to sit in a course without doing the homework.)
- I will regularly ask for feedback on how the class is going.
Please help me with your suggestions.
- Academic Integrity:
It is the understanding and
expectation that a student's signature on any test or assignment means
that the student neither gave nor received unauthorized aid.
Consult the following website for further details on the code of student conduct:
http://www2.ncsu.edu/prr/student_services/student_conduct/POL445.00.1.htm
Outline of Course Topics
- Preliminaries:
Introduction
Review of matrix algebra
Random vectors, multivariate normal distribution, review of linear regression
Introduction to modeling longitudinal data, exploring covariance structure
- Classical methods for normally distributed, balanced repeated measurements:
Univariate repeated measures analysis of variance
Multivariate repeated measures analysis of variance
Drawbacks and limitations of classical methods
- Methods for normally distributed, unbalanced repeated measurements:
General linear models and models for correlation
Random coefficient models
Linear mixed effects models
- Methods for non-normally distributed, unbalanced data:
Probability models for discrete and continuous nonnormal data and generalized linear models
Generalized estimating equations for population-averaged models
- Advanced topics (brief overview):
Generalized linear mixed effects models
Nonlinear mixed effects models
For students with disabilities:
Reasonable accommodations will be made for students with verifiable disabilities.
In order to take advantage of available accommodations, students must register
with Disability Services for Students at 1900 Student Health Center,
Campus Box 7509, 515-7653.
http://www.ncsu.edu/provost/offices/affirm_action/dss/
For more information on NC State's policy on working
with students with disabilities, please see the Academic Accommodations
for Students with Disabilities Regulation
http://www.ncsu.edu/policies/academic_affairs/courses_undergrad/REG02.20.1.php
Evaluations of course and instructor:
Online class evaluations will be available for students to complete during the
last two weeks of class. Students will receive an email
message directing them to a website where they can login using their Unity ID and
complete evaluations. All evaluations are confidential; instructors will never know how
any one student responded to any question, and students will never know the ratings for
any particular instructors.
Evaluation website
Student help desk: classeval@ncsu.edu
More information about ClassEval
This page was last modified on Dec. 30, 2010.